sleepr: Analyse Activity and Sleep Behaviour

Use behavioural variables to score activity and infer sleep from bouts of immobility. It is primarily designed to score sleep in fruit flies from Drosophila Activity Monitor (TriKinetics) and Ethoscope data. It implements sleep scoring using the "five-minute rule" (Hendricks et al. (2000) <doi:10.1016/S0896-6273(00)80877-6>), activity classification for Ethoscopes (Geissmann et al. (2017) <doi:10.1371/journal.pbio.2003026>) and a new algorithm to detect when animals are dead.

Version: 0.3.0
Depends: R (≥ 3.00), behavr
Imports: data.table
Suggests: testthat, covr, knitr
Published: 2018-10-30
DOI: 10.32614/CRAN.package.sleepr
Author: Quentin Geissmann [aut, cre]
Maintainer: Quentin Geissmann <qgeissmann at>
License: GPL-3
NeedsCompilation: no
Materials: README
CRAN checks: sleepr results


Reference manual: sleepr.pdf


Package source: sleepr_0.3.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): sleepr_0.3.0.tgz, r-oldrel (arm64): sleepr_0.3.0.tgz, r-release (x86_64): sleepr_0.3.0.tgz, r-oldrel (x86_64): sleepr_0.3.0.tgz


Please use the canonical form to link to this page.