Last updated on 2023-04-02 07:55:21 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.1 | 15.04 | 130.85 | 145.89 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.1.1 | 10.45 | 97.12 | 107.57 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.1.1 | 179.70 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.1 | 182.77 | OK | |||
| r-devel-windows-x86_64 | 2.1.1 | 25.00 | 161.00 | 186.00 | OK | |
| r-patched-linux-x86_64 | 2.1.1 | 15.99 | 123.66 | 139.65 | OK | |
| r-release-linux-x86_64 | 2.1.1 | 13.31 | 116.67 | 129.98 | OK | |
| r-release-macos-arm64 | 2.1.1 | 53.00 | OK | |||
| r-release-macos-x86_64 | 2.1.1 | 67.00 | OK | |||
| r-release-windows-x86_64 | 2.1.1 | 74.00 | 168.00 | 242.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.1 | 43.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 2.1.1 | 70.00 | ERROR | |||
| r-oldrel-windows-ix86+x86_64 | 2.1.1 | 29.00 | 149.00 | 178.00 | ERROR |
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-founder-inbreeding.R:24:3'): setFounderInbreeding works on lists ──
fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
3/3 mismatches (average diff: 1)
[1] 0 - 1 == -1
[2] 0 - 1 == -1
[3] 0 - 1 == -1
── Failure ('test-founder-inbreeding.R:27:3'): setFounderInbreeding works on lists ──
fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
1/3 mismatches
[2] 0 - 1 == -1
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/4s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-founder-inbreeding.R:24:3'): setFounderInbreeding works on lists ──
fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
3/3 mismatches (average diff: 1)
[1] 0 - 1 == -1
[2] 0 - 1 == -1
[3] 0 - 1 == -1
── Failure ('test-founder-inbreeding.R:27:3'): setFounderInbreeding works on lists ──
fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
1/3 mismatches
[2] 0 - 1 == -1
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
Version: 2.1.1
Check: tests
Result: ERROR
Running 'testthat.R' [9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(pedtools)
>
> test_check("pedtools")
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
== Skipped tests ===============================================================
* Identity examples - takes long time (1)
* TODO: Mendelian check for X sibships (1)
== Failed tests ================================================================
-- Failure ('test-founder-inbreeding.R:24:3'): setFounderInbreeding works on lists --
fi(y1) not equal to c(`1` = 1, `2` = 1, `4` = 1).
3/3 mismatches (average diff: 1)
[1] 0 - 1 == -1
[2] 0 - 1 == -1
[3] 0 - 1 == -1
-- Failure ('test-founder-inbreeding.R:27:3'): setFounderInbreeding works on lists --
fi(y2) not equal to c(`1` = 0, `2` = 1, `4` = 0).
1/3 mismatches
[2] 0 - 1 == -1
[ FAIL 2 | WARN 0 | SKIP 2 | PASS 588 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64