CRAN Package Check Results for Package bakR

Last updated on 2024-04-20 06:58:35 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1 834.46 449.29 1283.75 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.1 720.90 394.66 1115.56 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.1 1740.86 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.1 2258.55 NOTE
r-prerel-macos-arm64 1.0.1 433.00 NOTE
r-prerel-windows-x86_64 1.0.1 597.00 520.00 1117.00 NOTE
r-patched-linux-x86_64 1.0.1 0.01 2.91 2.92 ERROR
r-release-linux-x86_64 1.0.1 654.48 668.46 1322.94 OK
r-release-macos-arm64 1.0.1 409.00 NOTE
r-release-macos-x86_64 1.0.1 601.00 NOTE
r-release-windows-x86_64 1.0.1 748.00 638.00 1386.00 NOTE
r-oldrel-macos-arm64 1.0.1 416.00 NOTE
r-oldrel-windows-x86_64 1.0.1 712.00 614.00 1326.00 NOTE

Check Details

Version: 1.0.1
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘DESeq2’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘Differential-Synth.Rmd’ using rmarkdown Quitting from lines at lines 29-42 [setup] (Differential-Synth.Rmd) Error: processing vignette 'Differential-Synth.Rmd' failed with diagnostics: there is no package called 'DESeq2' --- failed re-building ‘Differential-Synth.Rmd’ --- re-building ‘Dropout.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-4-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 53610 bytes Input file size = 53760 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40776 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40776 Output IDAT size = 40776 bytes (12834 bytes decrease) Output file size = 40854 bytes (12906 bytes = 24.01% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31753 bytes Input file size = 31867 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24957 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24957 Output IDAT size = 24957 bytes (6796 bytes decrease) Output file size = 25035 bytes (6832 bytes = 21.44% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 32981 bytes Input file size = 33107 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25871 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25871 Output IDAT size = 25871 bytes (7110 bytes decrease) Output file size = 25949 bytes (7158 bytes = 21.62% decrease) --- finished re-building ‘Dropout.Rmd’ --- re-building ‘Getting-Started.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-11-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37454 bytes Input file size = 37580 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29364 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29364 Output IDAT size = 29364 bytes (8090 bytes decrease) Output file size = 29442 bytes (8138 bytes = 21.66% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-13-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37509 bytes Input file size = 37635 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26365 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26365 Output IDAT size = 26365 bytes (11144 bytes decrease) Output file size = 26443 bytes (11192 bytes = 29.74% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-14-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27198 bytes Input file size = 27312 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20601 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20601 Output IDAT size = 20601 bytes (6597 bytes decrease) Output file size = 20679 bytes (6633 bytes = 24.29% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-15-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 14068 bytes Input file size = 14158 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11989 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11989 Output IDAT size = 11989 bytes (2079 bytes decrease) Output file size = 12067 bytes (2091 bytes = 14.77% decrease) --- finished re-building ‘Getting-Started.Rmd’ --- re-building ‘NSS.Rmd’ using rmarkdown Quitting from lines at lines 32-46 [setup] (NSS.Rmd) Error: processing vignette 'NSS.Rmd' failed with diagnostics: there is no package called 'DESeq2' --- failed re-building ‘NSS.Rmd’ --- re-building ‘Troubleshooting.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-3-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17817 bytes Input file size = 17919 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15152 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15152 Output IDAT size = 15152 bytes (2665 bytes decrease) Output file size = 15230 bytes (2689 bytes = 15.01% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-4-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18092 bytes Input file size = 18194 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15926 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15926 Output IDAT size = 15926 bytes (2166 bytes decrease) Output file size = 16004 bytes (2190 bytes = 12.04% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31756 bytes Input file size = 31870 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27835 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27835 Output IDAT size = 27835 bytes (3921 bytes decrease) Output file size = 27913 bytes (3957 bytes = 12.42% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 66756 bytes Input file size = 66930 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52782 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52782 Output IDAT size = 52782 bytes (13974 bytes decrease) Output file size = 52860 bytes (14070 bytes = 21.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-7-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16982 bytes Input file size = 17084 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 15988 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 15988 Output IDAT size = 15988 bytes (994 bytes decrease) Output file size = 16066 bytes (1018 bytes = 5.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-11-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33892 bytes Input file size = 34018 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26477 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26477 Output IDAT size = 26477 bytes (7415 bytes decrease) Output file size = 26555 bytes (7463 bytes = 21.94% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-11-2.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 30946 bytes Input file size = 31060 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24102 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24102 Output IDAT size = 24102 bytes (6844 bytes decrease) Output file size = 24180 bytes (6880 bytes = 22.15% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-13-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 30761 bytes Input file size = 30875 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23968 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23968 Output IDAT size = 23968 bytes (6793 bytes decrease) Output file size = 24046 bytes (6829 bytes = 22.12% decrease) --- finished re-building ‘Troubleshooting.Rmd’ --- re-building ‘bakR-Fn.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27969 bytes Input file size = 28083 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20270 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20270 Output IDAT size = 20270 bytes (7699 bytes decrease) Output file size = 20348 bytes (7735 bytes = 27.54% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 22866 bytes Input file size = 22968 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16928 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16928 Output IDAT size = 16928 bytes (5938 bytes decrease) Output file size = 17006 bytes (5962 bytes = 25.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-7-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 15494 bytes Input file size = 15584 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13000 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13000 Output IDAT size = 13000 bytes (2494 bytes decrease) Output file size = 13078 bytes (2506 bytes = 16.08% decrease) --- finished re-building ‘bakR-Fn.Rmd’ --- re-building ‘bakR-Quickstart.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37547 bytes Input file size = 37673 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26427 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26427 Output IDAT size = 26427 bytes (11120 bytes decrease) Output file size = 26505 bytes (11168 bytes = 29.64% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26954 bytes Input file size = 27068 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20437 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20437 Output IDAT size = 20437 bytes (6517 bytes decrease) Output file size = 20515 bytes (6553 bytes = 24.21% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-7-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 13740 bytes Input file size = 13830 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11814 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11814 Output IDAT size = 11814 bytes (1926 bytes decrease) Output file size = 11892 bytes (1938 bytes = 14.01% decrease) --- finished re-building ‘bakR-Quickstart.Rmd’ SUMMARY: processing the following files failed: ‘Differential-Synth.Rmd’ ‘NSS.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘Differential-Synth.Rmd’ using rmarkdown Quitting from lines at lines 29-42 [setup] (Differential-Synth.Rmd) Error: processing vignette 'Differential-Synth.Rmd' failed with diagnostics: there is no package called 'DESeq2' --- failed re-building ‘Differential-Synth.Rmd’ --- re-building ‘Dropout.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-4-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 53610 bytes Input file size = 53760 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40776 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40776 Output IDAT size = 40776 bytes (12834 bytes decrease) Output file size = 40854 bytes (12906 bytes = 24.01% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31753 bytes Input file size = 31867 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24957 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24957 Output IDAT size = 24957 bytes (6796 bytes decrease) Output file size = 25035 bytes (6832 bytes = 21.44% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Dropout_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 32981 bytes Input file size = 33107 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25871 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25871 Output IDAT size = 25871 bytes (7110 bytes decrease) Output file size = 25949 bytes (7158 bytes = 21.62% decrease) --- finished re-building ‘Dropout.Rmd’ --- re-building ‘Getting-Started.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-11-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37454 bytes Input file size = 37580 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29364 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29364 Output IDAT size = 29364 bytes (8090 bytes decrease) Output file size = 29442 bytes (8138 bytes = 21.66% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-13-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37509 bytes Input file size = 37635 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26365 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26365 Output IDAT size = 26365 bytes (11144 bytes decrease) Output file size = 26443 bytes (11192 bytes = 29.74% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-14-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27198 bytes Input file size = 27312 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20601 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20601 Output IDAT size = 20601 bytes (6597 bytes decrease) Output file size = 20679 bytes (6633 bytes = 24.29% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Getting-Started_files/figure-html/unnamed-chunk-15-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 14068 bytes Input file size = 14158 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11989 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11989 Output IDAT size = 11989 bytes (2079 bytes decrease) Output file size = 12067 bytes (2091 bytes = 14.77% decrease) --- finished re-building ‘Getting-Started.Rmd’ --- re-building ‘NSS.Rmd’ using rmarkdown Quitting from lines at lines 32-46 [setup] (NSS.Rmd) Error: processing vignette 'NSS.Rmd' failed with diagnostics: there is no package called 'DESeq2' --- failed re-building ‘NSS.Rmd’ --- re-building ‘Troubleshooting.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-3-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17817 bytes Input file size = 17919 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15152 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15152 Output IDAT size = 15152 bytes (2665 bytes decrease) Output file size = 15230 bytes (2689 bytes = 15.01% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-4-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18092 bytes Input file size = 18194 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15926 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15926 Output IDAT size = 15926 bytes (2166 bytes decrease) Output file size = 16004 bytes (2190 bytes = 12.04% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 31756 bytes Input file size = 31870 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27835 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27835 Output IDAT size = 27835 bytes (3921 bytes decrease) Output file size = 27913 bytes (3957 bytes = 12.42% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 66756 bytes Input file size = 66930 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52782 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52782 Output IDAT size = 52782 bytes (13974 bytes decrease) Output file size = 52860 bytes (14070 bytes = 21.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-7-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 16982 bytes Input file size = 17084 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 15988 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 15988 Output IDAT size = 15988 bytes (994 bytes decrease) Output file size = 16066 bytes (1018 bytes = 5.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-11-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33892 bytes Input file size = 34018 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26477 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26477 Output IDAT size = 26477 bytes (7415 bytes decrease) Output file size = 26555 bytes (7463 bytes = 21.94% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-11-2.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 30988 bytes Input file size = 31102 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24166 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24166 Output IDAT size = 24166 bytes (6822 bytes decrease) Output file size = 24244 bytes (6858 bytes = 22.05% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/Troubleshooting_files/figure-html/unnamed-chunk-13-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 30761 bytes Input file size = 30875 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23968 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23968 Output IDAT size = 23968 bytes (6793 bytes decrease) Output file size = 24046 bytes (6829 bytes = 22.12% decrease) --- finished re-building ‘Troubleshooting.Rmd’ --- re-building ‘bakR-Fn.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27969 bytes Input file size = 28083 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20270 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20270 Output IDAT size = 20270 bytes (7699 bytes decrease) Output file size = 20348 bytes (7735 bytes = 27.54% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 22866 bytes Input file size = 22968 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16928 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16928 Output IDAT size = 16928 bytes (5938 bytes decrease) Output file size = 17006 bytes (5962 bytes = 25.96% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Fn_files/figure-html/unnamed-chunk-7-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 15494 bytes Input file size = 15584 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13000 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13000 Output IDAT size = 13000 bytes (2494 bytes decrease) Output file size = 13078 bytes (2506 bytes = 16.08% decrease) --- finished re-building ‘bakR-Fn.Rmd’ --- re-building ‘bakR-Quickstart.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37547 bytes Input file size = 37673 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26427 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26427 Output IDAT size = 26427 bytes (11120 bytes decrease) Output file size = 26505 bytes (11168 bytes = 29.64% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-6-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26954 bytes Input file size = 27068 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20437 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20437 Output IDAT size = 20437 bytes (6517 bytes decrease) Output file size = 20515 bytes (6553 bytes = 24.21% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bakR.Rcheck/vign_test/bakR/vignettes/bakR-Quickstart_files/figure-html/unnamed-chunk-7-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 13740 bytes Input file size = 13830 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11814 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11814 Output IDAT size = 11814 bytes (1926 bytes decrease) Output file size = 11892 bytes (1938 bytes = 14.01% decrease) --- finished re-building ‘bakR-Quickstart.Rmd’ SUMMARY: processing the following files failed: ‘Differential-Synth.Rmd’ ‘NSS.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.1
Check: installed package size
Result: NOTE installed size is 9.5Mb sub-directories of 1Mb or more: libs 7.7Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-prerel-macos-arm64, r-prerel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-windows-x86_64

Version: 1.0.1
Check: dependencies in R code
Result: NOTE Namespaces in Imports field not imported from: ‘RcppParallel’ ‘rstantools’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.1
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-prerel-macos-arm64, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64

Version: 1.0.1
Check: whether package can be installed
Result: ERROR Installation failed. Flavor: r-patched-linux-x86_64