CRAN Package Check Results for Package clinDataReview

Last updated on 2022-08-13 07:55:18 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.2 13.87 163.67 177.54 OK
r-devel-linux-x86_64-debian-gcc 1.2.2 10.84 119.77 130.61 OK
r-devel-linux-x86_64-fedora-clang 1.2.2 225.25 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2.2 220.61 OK
r-devel-windows-x86_64 1.2.2 142.00 217.00 359.00 NOTE
r-patched-linux-x86_64 1.2.2 10.12 151.50 161.62 OK
r-release-linux-x86_64 1.2.2 9.06 151.78 160.84 OK
r-release-macos-arm64 1.2.2 57.00 NOTE
r-release-macos-x86_64 1.2.2 101.00 NOTE
r-release-windows-x86_64 1.2.2 234.00 199.00 433.00 NOTE
r-oldrel-macos-arm64 1.2.2 64.00 NOTE
r-oldrel-macos-x86_64 1.2.2 79.00 NOTE
r-oldrel-windows-ix86+x86_64 1.2.2 30.00 201.00 231.00 ERROR

Check Details

Version: 1.2.2
Check: installed package size
Result: NOTE
     installed size is 6.0Mb
     sub-directories of 1Mb or more:
     doc 4.2Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2.2
Check: tests
Result: ERROR
     Running 'testthat.R' [31s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(clinDataReview)
     >
     > test_check("clinDataReview")
     adding: report.html (deflated 64%)
     adding: report_dependencies7a6c2aa76c88/ (stored 0%)
     adding: report_dependencies7a6c2aa76c88/file7a6c37b0619b.html (deflated 8%)
     [ FAIL 3 | WARN 1 | SKIP 23 | PASS 424 ]
    
     == Skipped tests ===============================================================
     * On CRAN (23)
    
     == Failed tests ================================================================
     -- Error (test_render_clinDataReviewReport.R:219:2): The creation of html file from markdown files for specified config files is successful --
     Error: Using anchor_sections requires Pandoc 2.0+
     Backtrace:
     x
     1. \-clinDataReview::convertMdToHtml(...) at test_render_clinDataReviewReport.R:219:8
     2. \-rmarkdown::render(...)
     3. \-rmarkdown:::create_output_format(output_format$name, output_format$options)
     4. +-base::do.call(output_format_func, options)
     5. \-clinDataReview (local) `<fn>`()
     6. \-bookdown::gitbook(...)
     7. \-bookdown::html_document2(...)
     8. \-rmarkdown::html_document(...)
     9. \-rmarkdown:::add_anchor_sections(anchor_sections, section_divs)
     -- Error (test_reportingFormats.R:5:2): A gitbook clinical data review format is correctly created --
     Error: Using anchor_sections requires Pandoc 2.0+
     Backtrace:
     x
     1. \-clinDataReview::gitbook_clinDataReview_report() at test_reportingFormats.R:5:8
     2. \-bookdown::gitbook(...)
     3. \-bookdown::html_document2(...)
     4. \-rmarkdown::html_document(...)
     5. \-rmarkdown:::add_anchor_sections(anchor_sections, section_divs)
     -- Error (test_reportingFormats.R:58:2): A logo is correctly added to a gitbook clinical data review report --
     Error: Using anchor_sections requires Pandoc 2.0+
     Backtrace:
     x
     1. +-testthat::expect_silent(res <- gitbook_clinDataReview_report(logo = pathPlotBasic)) at test_reportingFormats.R:58:8
     2. | \-testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
     3. | +-testthat (local) .capture(...)
     4. | | +-withr::with_output_sink(...)
     5. | | | \-base::force(code)
     6. | | +-base::withCallingHandlers(...)
     7. | | \-base::withVisible(code)
     8. | \-rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
     9. \-clinDataReview::gitbook_clinDataReview_report(logo = pathPlotBasic)
     10. \-bookdown::gitbook(...)
     11. \-bookdown::html_document2(...)
     12. \-rmarkdown::html_document(...)
     13. \-rmarkdown:::add_anchor_sections(anchor_sections, section_divs)
    
     [ FAIL 3 | WARN 1 | SKIP 23 | PASS 424 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64