CRAN Package Check Results for Package IDConverter

Last updated on 2022-08-08 07:51:01 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.2 3.13 44.82 47.95 OK
r-devel-linux-x86_64-debian-gcc 0.3.2 2.48 33.33 35.81 OK
r-devel-linux-x86_64-fedora-clang 0.3.2 68.37 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3.2 63.15 NOTE
r-devel-windows-x86_64 0.3.2 18.00 107.00 125.00 OK
r-patched-linux-x86_64 0.3.2 2.47 40.13 42.60 OK
r-release-linux-x86_64 0.3.2 OK
r-release-macos-arm64 0.3.2 60.00 NOTE
r-release-macos-x86_64 0.3.2 55.00 NOTE
r-release-windows-x86_64 0.3.2 19.00 151.00 170.00 ERROR
r-oldrel-macos-arm64 0.3.2 46.00 NOTE
r-oldrel-macos-x86_64 0.3.2 50.00 NOTE
r-oldrel-windows-ix86+x86_64 0.3.2 9.00 55.00 64.00 ERROR

Check Details

Version: 0.3.2
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘tibble’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.3.2
Check: tests
Result: ERROR
     Running 'testthat.R' [85s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(IDConverter)
     >
     > test_check("IDConverter")
     trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
     trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
     Content type 'application/octet-stream' length 380819 bytes (371 KB)
     ==================================================
     downloaded 371 KB
    
     trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
     Content type 'application/octet-stream' length 1530163 bytes (1.5 MB)
     ==================================================
     downloaded 1.5 MB
    
     trying URL 'https://zenodo.org/record/6342397/files/tcga.rda'
     Content type 'application/octet-stream' length 4011256 bytes (3.8 MB)
     ==================================================
     downloaded 3.8 MB
    
     [ FAIL 1 | WARN 2 | SKIP 0 | PASS 9 ]
    
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error (test-roxytest-testexamples-convert_icgc.R:8:3): Function convert_icgc() @ L25 ──
     Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
    
     Backtrace:
     ▆
     1. └─IDConverter::convert_icgc("SP29019") at test-roxytest-testexamples-convert_icgc.R:8:2
     2. └─IDConverter:::convert(dt, x, from, to, multiple)
    
     [ FAIL 1 | WARN 2 | SKIP 0 | PASS 9 ]
     Error: Test failures
     Execution halted
Flavor: r-release-windows-x86_64

Version: 0.3.2
Check: tests
Result: ERROR
     Running 'testthat.R' [3s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(IDConverter)
     >
     > test_check("IDConverter")
     trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
     trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
     trying URL 'https://zenodo.org/record/6342397/files/tcga.rda'
     [ FAIL 3 | WARN 6 | SKIP 0 | PASS 2 ]
    
     == Failed tests ================================================================
     -- Error (test-roxytest-testexamples-convert_icgc.R:8:3): Function convert_icgc() @ L25 --
     Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
    
     Backtrace:
     x
     1. \-IDConverter::convert_icgc("SP29019") at test-roxytest-testexamples-convert_icgc.R:8:2
     2. \-IDConverter:::convert(dt, x, from, to, multiple)
     -- Error (test-roxytest-testexamples-convert_pcawg.R:8:3): Function convert_pcawg() @ L38 --
     Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
    
     Backtrace:
     x
     1. \-IDConverter::convert_pcawg("SP1677") at test-roxytest-testexamples-convert_pcawg.R:8:2
     2. \-IDConverter:::convert(dt, x, from, to, multiple)
     -- Error (test-roxytest-testexamples-convert_tcga.R:8:3): Function convert_tcga() @ L24 --
     Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
    
     Backtrace:
     x
     1. \-IDConverter::convert_tcga("TCGA-02-0001-10") at test-roxytest-testexamples-convert_tcga.R:8:2
     2. \-IDConverter:::convert(dt, x, from, to, multiple)
    
     [ FAIL 3 | WARN 6 | SKIP 0 | PASS 2 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64