Last updated on 2022-08-08 07:51:01 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.2 | 3.13 | 44.82 | 47.95 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.2 | 2.48 | 33.33 | 35.81 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.2 | 68.37 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.2 | 63.15 | NOTE | |||
| r-devel-windows-x86_64 | 0.3.2 | 18.00 | 107.00 | 125.00 | OK | |
| r-patched-linux-x86_64 | 0.3.2 | 2.47 | 40.13 | 42.60 | OK | |
| r-release-linux-x86_64 | 0.3.2 | OK | ||||
| r-release-macos-arm64 | 0.3.2 | 60.00 | NOTE | |||
| r-release-macos-x86_64 | 0.3.2 | 55.00 | NOTE | |||
| r-release-windows-x86_64 | 0.3.2 | 19.00 | 151.00 | 170.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.3.2 | 46.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 0.3.2 | 50.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 0.3.2 | 9.00 | 55.00 | 64.00 | ERROR |
Version: 0.3.2
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘tibble’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.3.2
Check: tests
Result: ERROR
Running 'testthat.R' [85s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(IDConverter)
>
> test_check("IDConverter")
trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
Content type 'application/octet-stream' length 380819 bytes (371 KB)
==================================================
downloaded 371 KB
trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
Content type 'application/octet-stream' length 1530163 bytes (1.5 MB)
==================================================
downloaded 1.5 MB
trying URL 'https://zenodo.org/record/6342397/files/tcga.rda'
Content type 'application/octet-stream' length 4011256 bytes (3.8 MB)
==================================================
downloaded 3.8 MB
[ FAIL 1 | WARN 2 | SKIP 0 | PASS 9 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test-roxytest-testexamples-convert_icgc.R:8:3): Function convert_icgc() @ L25 ──
Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
Backtrace:
▆
1. └─IDConverter::convert_icgc("SP29019") at test-roxytest-testexamples-convert_icgc.R:8:2
2. └─IDConverter:::convert(dt, x, from, to, multiple)
[ FAIL 1 | WARN 2 | SKIP 0 | PASS 9 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.3.2
Check: tests
Result: ERROR
Running 'testthat.R' [3s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(IDConverter)
>
> test_check("IDConverter")
trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
trying URL 'https://zenodo.org/record/6342397/files/tcga.rda'
[ FAIL 3 | WARN 6 | SKIP 0 | PASS 2 ]
== Failed tests ================================================================
-- Error (test-roxytest-testexamples-convert_icgc.R:8:3): Function convert_icgc() @ L25 --
Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
Backtrace:
x
1. \-IDConverter::convert_icgc("SP29019") at test-roxytest-testexamples-convert_icgc.R:8:2
2. \-IDConverter:::convert(dt, x, from, to, multiple)
-- Error (test-roxytest-testexamples-convert_pcawg.R:8:3): Function convert_pcawg() @ L38 --
Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
Backtrace:
x
1. \-IDConverter::convert_pcawg("SP1677") at test-roxytest-testexamples-convert_pcawg.R:8:2
2. \-IDConverter:::convert(dt, x, from, to, multiple)
-- Error (test-roxytest-testexamples-convert_tcga.R:8:3): Function convert_tcga() @ L24 --
Error in `convert(dt, x, from, to, multiple)`: Bad identifier types, valid input are:
Backtrace:
x
1. \-IDConverter::convert_tcga("TCGA-02-0001-10") at test-roxytest-testexamples-convert_tcga.R:8:2
2. \-IDConverter:::convert(dt, x, from, to, multiple)
[ FAIL 3 | WARN 6 | SKIP 0 | PASS 2 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64